Release 56
(Apr 24, 2025)

QTL 152798 Description:

 Trait Information
Trait name: Horn number Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: HN Clinical Measurement Ontology: Horn number
 QTL Map Information
Chromosome:2
QTL Peak Location:167.12 (cM)
QTL Span:167.12-167.12 (cM)
132.0-132.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs424229224
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values2.51E-11
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #152798
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Jacob and Navajo-Churro sheep.
     Breeds associated:
    Design:Animals were genotyped using the Illumina OvineHD BeadChip and analyzed for horn number phenotypes. A total of 570,712 SNPs were used for analysis.
    Analysis:A case/control allelic association test was performed.
    Software:PLINK
    Notes: 
    Links:Edit

     Reference
    Authors:Kijas JW, Hadfield T, Naval Sanchez M, Cockett N
    Affiliation:Department of Animal, Dairy, and Veterinary Sciences, Utah State University, Logan, UT, 84322-4700, USA
    Title:Genome-wide association reveals the locus responsible for four-horned ruminant
    Journal:Animal genetics, 2016, 47(2): 258-62
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #26767438
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL152798 was published in 2016, and was curated into QTLdb on 2018-02-26. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:152798

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team