Authors: Maddahi N, Sadeghi M, Miraee Ashtiani SR, Kholghi M, Jalil Sarghale A
(Contact: sadeghimos@ut.ac.ir ) Affiliation: Department of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran Title: Genome-wide association studies and candidate genes networks affecting reproductive traits using Iranian Holstein sequence data Journal: BMC Genomics, 26(1): 656 (2025)
DOI :
10.1186/s12864-025-11744-1 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Age at puberty
Chr.1 : Asso:320840 . Chr.2 : Asso:320819 . Chr.6 : Asso:320844 . Chr.7 : Asso:320818 , Asso:320820 , Asso:320821 . Chr.11 : Asso:320814 , Asso:320815 , Asso:320816 , Asso:320817 , Asso:320830 , Asso:320831 , Asso:320832 , Asso:320845 , Asso:320847 . Chr.13 : Asso:320827 , Asso:320828 , Asso:320829 . Chr.15 : Asso:320822 , Asso:320864 . Chr.18 : Asso:320833 . Chr.20 : Asso:320823 , Asso:320824 , Asso:320825 . Chr.22 : Asso:320841 , Asso:320842 , Asso:320843 , Asso:320859 , Asso:320860 , Asso:320861 , Asso:320862 , Asso:320863 , Asso:320865 . Chr.25 : Asso:320826 . Chr.29 : Asso:320854 .
QTL for Age at first calving
Chr.18 : Asso:320846 . Chr.25 : Asso:320866 . Chr.26 : Asso:320834 , Asso:320835 , Asso:320836 , Asso:320837 , Asso:320851 , Asso:320852 , Asso:320853 .
QTL for Calving to conception interval
Chr.2 : Asso:320838 . Chr.6 : Asso:320867 , Asso:320868 . Chr.14 : Asso:320855 , Asso:320856 .
QTL for Inseminations per conception
Chr.24 : Asso:320839 , Asso:320848 , Asso:320849 , Asso:320850 . Chr.28 : Asso:320869 .
QTL for Interval from first to last insemination
Chr.8 : Asso:320870 . Chr.20 : Asso:320857 . Chr.24 : Asso:320858 .
QTL/association Reported by chromosomes:
Chr.1 (1) ,
Chr.2 (2) ,
Chr.6 (3) ,
Chr.7 (3) ,
Chr.8 (1) ,
Chr.11 (9) ,
Chr.13 (3) ,
Chr.14 (2) ,
Chr.15 (2) ,
Chr.18 (2) ,
Chr.20 (4) ,
Chr.22 (9) ,
Chr.24 (5) ,
Chr.25 (2) ,
Chr.26 (7) ,
Chr.28 (1) ,
Chr.29 (1) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Maddahi N, Sadeghi M, Miraee Ashtiani SR, Kholghi M, Jalil Sarghale A (2025). Genome-wide association studies and candidate genes networks affecting reproductive traits using Iranian Holstein sequence data. BMC genomics, 26(1): 656;
Curated into QTLdb on 2025-10-22. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=WlTv6Y5TcV
OR
Maddahi N, Sadeghi M, Miraee Ashtiani SR, Kholghi M, Jalil Sarghale A (2025). Genome-wide association studies and candidate genes networks affecting reproductive traits using Iranian Holstein sequence data. BMC genomics, 26(1): 656; DOI: https://dx.doi.org/10.1186/s12864-025-11744-1
